Student Publications

Both Master’s and MD/MS Systems Medicine students have opportunities to publish student publications. The publications have been published in various journals, notably, the Systems Medicine: Journal of Medical Systems Biology and Network Medicine.

Author names that are bolded with an asterisk(*) are Systems Medicine students.

  1. Linking Advanced Multiplex Immunohistochemistry with Patient Clinicopathologic and Outcome Data to Facilitate Translational  Research in Invasive Lobular Breast Cancer: Chaldekas KM*, Berry VL, Duttargi A, Harris BT, Riggins RB, Berry DL
  2. Informatic Analysis of 3 miRNAs Decreased in Neuroblastoma Cells by GWI Serum: Baby Anusha Satravada*, James N. Baraniuk
  3. Informatic Analysis of microRNA-720 in GWI Serum Cytotoxicity: Sushma Maddipatla*, James N. Baraniuk
  4. Investigating the Association Between HbA1c Levels and Stroke Incidence Using HER Data: Personalized Medicine Approach. Kanchan Bhasin*, Belqes Ahmadi*, Nawar Shara, Sona Vasudevan
  5. Analysis of Host Gene Expression in HEK-293 Cells Infected with Zika Virus: Navin Vijayarangan*, Tadahisa Teramoto, Radhakrishnan Padmanabhan
  6. From Bugs to Diseases: An Analysis of Similarities in Microbiota Changes Across Diseases: Natasha Raja*, Mansi Maini*, Douglas Varner, Sona Vasudevan
  7. Influence of WNT and DNA Damage Response Pathway Alterations on Outcomes in Patients with Unresectable Metastatic Colorectal Cancer: Sebastian Mondaca, Henry S Walch*, Subhiksha Nandakumar, Walid K. Chatila, Jaclyn Frances Hechtman, Andrea Cercek, Luis A. Diaz, Francisco Sanchez-Vega, Nancy E. Kemeny, Neil Howard Segal, Zsofia Kinga Stadler, Anna M. Varghese, Efsevia Vakiani, Marc Ladanyi, Michael F. Berger, David B. Solit, Jinru Shia, Leonard B. Saltz, Nikolaus D Schultz, Rona Yaeger
  8. Madhavan S, Gusev Y, Natarajan TG, Song L, Bhuvaneshwar K, Gauba R, Pandey A*, Haddad BR, Goerlitz D, Cheema AK, Juhl H, Kallakury B, Marshall JL, Byers SW and Weiner LM (2013): Genome-wide multi-omics profiling of colorectal cancer identifies immune determinants strongly associated with relapse. Front Genet 4(236), 1-19.
  9. Kaur P, Rizk N, Ibrahim S, Luo Y, Younes N, Perry B*, Dennis K, Zirie M, Luta G, and Cheema AK (2013): Quantitative metabolomic and lipidomic profiling reveals aberrant amino acid metabolism in type 2 diabetes. Mol Biosyst 9, 307-317.
  10. Usala GMR*, Fernandez SJ, Mete M, Cowen L, Shara NM, Barsony J and Verbalis, JG (2015): Hyponatremia is Associated with Increased Osteoporosis and Bone Fractures in a Large U. S. Health System Population J Clin Endocrinol Metab  jc20151261 [Epub ahead of print]
  11. Mott BT, Eastman RT, Guha R, Sherlach KS, Siriwardana A, Shinn P, McKnight C, Michael S, Lacerda-Queiroz N, Patel PR, Khine P, Sun H, Kasbekar M, Aghdam N*, Fontaine SD, Liu D, Mierzwa T, Mathews-Griner LA, Ferrer M, Renslo AR, Inglese J, Yuan J, Roepe PD, Su X and Thomas CJ (2015): High-throughput matrix screening identifies synergistic and antagonistic antimalarial drug combinations.
  12. Escaned J, Echavarría-Pinto M, Garcia-Garcia HM, van de Hoef TP, de Vries T, Kaul P, Raveendran G, Altman JD*, Kurz HI, Brechtken J, Tulli M,Von Birgelen C, Schneider JE, Khashaba AA, Jeremias A, Baucum J, Moreno R, Meuwissen M, Mishkel G, van Geuns RJ, Levite H, Lopez-Palop R, Mayhew M, Serruys PW, Samady H, Piek JJ, and Lerman A (2015): Prospective Assessment of the Diagnostic Accuracy of Instantaneous Wave-Free Ratio to Assess Coronary Stenosis Relevance: Results of ADVISE II International, Multicenter Study (ADenosine Vasodilator Independent Stenosis Evaluation II). JACC Cardiovasc Interv 8, 824-833.
  13. Narayan, S, Vaishnavi N, Baraniuk JN: Informatics Inference of exercise-induced modulation of brain pathways based on cerebrospinal fluid micro-RNAs in Myalgic Encephalomyelitis/chronic Fatigue Syndrome (ME/CFS) (Manuscript under review).